| /* { dg-do compile } */ |
| /* { dg-require-effective-target pthread } */ |
| /* { dg-options "-O3 -ftree-parallelize-loops=4" } */ |
| |
| struct p7prior_s { |
| int mnum; /* number of mat emission Dirichlet mixtures */ |
| float mq[200]; /* probabilities of mnum components */ |
| float m[200][20]; /* match emission terms per mix component */ |
| }; |
| |
| struct p7prior_s *default_amino_prior(void); |
| struct p7prior_s *P7AllocPrior(void); |
| |
| struct p7prior_s * |
| default_amino_prior(void) |
| { |
| struct p7prior_s *pri; |
| int x, q; |
| |
| static float defmq[5] = { |
| 0.178091, 0.056591, 0.0960191, 0.0781233, 0.0834977 }; |
| static float defm[5][6] = { |
| { 0.270671, 0.039848, 0.017576, 0.016415, 0.014268, 0.216147 }, |
| { 0.021465, 0.010300, 0.011741, 0.010883, 0.385651, 0.029156 }, |
| { 0.561459, 0.045448, 0.438366, 0.764167, 0.087364, 0.583402 }, |
| { 0.070143, 0.011140, 0.019479, 0.094657, 0.013162, 0.073732 }, |
| { 0.041103, 0.014794, 0.005610, 0.010216, 0.153602, 0.012049 } |
| }; |
| |
| pri = P7AllocPrior(); |
| pri->mnum = 5; |
| for (q = 0; q < pri->mnum; q++) |
| { |
| pri->mq[q] = defmq[q]; |
| for (x = 0; x < 6; x++) |
| pri->m[q][x] = defm[q][x]; |
| } |
| return pri; |
| } |
| |